Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Usp47Q8BY87 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC26.74■■□□□ 1.87
Usp47Q8BY87 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Usp47Q8BY87 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Usp47Q8BY87 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Usp47Q8BY87 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Usp47Q8BY87 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Usp47Q8BY87 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC26.73■■□□□ 1.87
Usp47Q8BY87 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp47Q8BY87 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Usp47Q8BY87 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp47Q8BY87 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp47Q8BY87 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Usp47Q8BY87 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Gm3807-201ENSMUST00000193520 1168 ntBASIC26.71■■□□□ 1.87
Usp47Q8BY87 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Usp47Q8BY87 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
Usp47Q8BY87 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Usp47Q8BY87 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC26.7■■□□□ 1.86
Usp47Q8BY87 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
Usp47Q8BY87 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Usp47Q8BY87 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Usp47Q8BY87 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Usp47Q8BY87 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Usp47Q8BY87 Gm12527-201ENSMUST00000117967 564 ntBASIC26.69■■□□□ 1.86
Usp47Q8BY87 Rab3c-203ENSMUST00000224180 967 ntBASIC26.69■■□□□ 1.86
Usp47Q8BY87 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Usp47Q8BY87 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC26.69■■□□□ 1.86
Usp47Q8BY87 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Usp47Q8BY87 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC26.68■■□□□ 1.86
Usp47Q8BY87 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp47Q8BY87 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp47Q8BY87 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Usp47Q8BY87 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Usp47Q8BY87 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Usp47Q8BY87 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp47Q8BY87 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp47Q8BY87 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp47Q8BY87 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Usp47Q8BY87 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp47Q8BY87 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Usp47Q8BY87 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp47Q8BY87 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp47Q8BY87 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Usp47Q8BY87 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Usp47Q8BY87 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Usp47Q8BY87 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Usp47Q8BY87 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC26.66■■□□□ 1.86
Usp47Q8BY87 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC26.66■■□□□ 1.86
Usp47Q8BY87 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Usp47Q8BY87 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Usp47Q8BY87 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Usp47Q8BY87 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Usp47Q8BY87 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Usp47Q8BY87 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Usp47Q8BY87 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC26.65■■□□□ 1.86
Usp47Q8BY87 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC26.65■■□□□ 1.86
Usp47Q8BY87 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp47Q8BY87 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Usp47Q8BY87 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC26.64■■□□□ 1.86
Usp47Q8BY87 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms