Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn3bQ8BHK2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.54■□□□□ 0.4
Scn3bQ8BHK2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Scn3bQ8BHK2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn3bQ8BHK2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn3bQ8BHK2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn3bQ8BHK2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn3bQ8BHK2 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.52■□□□□ 0.39
Scn3bQ8BHK2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn3bQ8BHK2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Scn3bQ8BHK2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.52■□□□□ 0.39
Scn3bQ8BHK2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn3bQ8BHK2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn3bQ8BHK2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Gm5921-201ENSMUST00000075898 882 ntBASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Scn3bQ8BHK2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn3bQ8BHK2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3bQ8BHK2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Scn3bQ8BHK2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scn3bQ8BHK2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scn3bQ8BHK2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.48■□□□□ 0.39
Scn3bQ8BHK2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3bQ8BHK2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scn3bQ8BHK2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn3bQ8BHK2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms