Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim6Q8BGE7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.94■□□□□ 0.78
Trim6Q8BGE7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim6Q8BGE7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Gm14117-201ENSMUST00000122417 843 ntBASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Gm45102-201ENSMUST00000207427 857 ntBASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Rps24-207ENSMUST00000224568 714 ntBASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim6Q8BGE7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Serp2-204ENSMUST00000228055 705 ntBASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim6Q8BGE7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim6Q8BGE7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Trim6Q8BGE7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Trim6Q8BGE7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim6Q8BGE7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.89■□□□□ 0.77
Trim6Q8BGE7 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.89■□□□□ 0.77
Trim6Q8BGE7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim6Q8BGE7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim6Q8BGE7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.89■□□□□ 0.77
Trim6Q8BGE7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim6Q8BGE7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim6Q8BGE7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim6Q8BGE7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim6Q8BGE7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim6Q8BGE7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim6Q8BGE7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim6Q8BGE7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms