Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim62Q80V85 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim62Q80V85 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim62Q80V85 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.48■□□□□ 0.71
Trim62Q80V85 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Trim62Q80V85 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim62Q80V85 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim62Q80V85 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Trim62Q80V85 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim62Q80V85 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim62Q80V85 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trim62Q80V85 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim62Q80V85 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.47■□□□□ 0.71
Trim62Q80V85 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim62Q80V85 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim62Q80V85 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim62Q80V85 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim62Q80V85 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim62Q80V85 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim62Q80V85 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim62Q80V85 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim62Q80V85 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim62Q80V85 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim62Q80V85 Gm7290-201ENSMUST00000104990 617 ntBASIC19.46■□□□□ 0.71
Trim62Q80V85 Gm12918-201ENSMUST00000120234 636 ntBASIC19.46■□□□□ 0.71
Trim62Q80V85 Gm15710-201ENSMUST00000121821 636 ntBASIC19.46■□□□□ 0.71
Trim62Q80V85 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim62Q80V85 Gm5075-201ENSMUST00000196916 622 ntBASIC19.46■□□□□ 0.71
Trim62Q80V85 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim62Q80V85 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim62Q80V85 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.46■□□□□ 0.71
Trim62Q80V85 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.46■□□□□ 0.71
Trim62Q80V85 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trim62Q80V85 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Trim62Q80V85 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim62Q80V85 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim62Q80V85 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim62Q80V85 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.45■□□□□ 0.7
Trim62Q80V85 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.45■□□□□ 0.7
Trim62Q80V85 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim62Q80V85 Gm12933-201ENSMUST00000120203 872 ntBASIC19.45■□□□□ 0.7
Trim62Q80V85 Nespas-201ENSMUST00000143738 1083 ntBASIC19.45■□□□□ 0.7
Trim62Q80V85 Gm37179-201ENSMUST00000194862 823 ntBASIC19.45■□□□□ 0.7
Trim62Q80V85 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Trim62Q80V85 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim62Q80V85 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim62Q80V85 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim62Q80V85 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim62Q80V85 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim62Q80V85 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim62Q80V85 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.45■□□□□ 0.7
Trim62Q80V85 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim62Q80V85 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim62Q80V85 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim62Q80V85 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim62Q80V85 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim62Q80V85 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim62Q80V85 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim62Q80V85 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim62Q80V85 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim62Q80V85 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim62Q80V85 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim62Q80V85 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim62Q80V85 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim62Q80V85 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim62Q80V85 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.44■□□□□ 0.7
Trim62Q80V85 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim62Q80V85 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Trim62Q80V85 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.43■□□□□ 0.7
Trim62Q80V85 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.43■□□□□ 0.7
Trim62Q80V85 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim62Q80V85 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim62Q80V85 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim62Q80V85 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim62Q80V85 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim62Q80V85 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.42■□□□□ 0.7
Trim62Q80V85 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trim62Q80V85 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms