Protein–RNA interactions for Protein: Q80UV9

Taf1, Transcription initiation factor TFIID subunit 1, mousemouse

Predictions only

Length 1,891 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1Q80UV9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Taf1Q80UV9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Taf1Q80UV9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Taf1Q80UV9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Taf1Q80UV9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Taf1Q80UV9 Iqck-206ENSMUST00000208658 2891 ntBASIC20.29■□□□□ 0.84
Taf1Q80UV9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Taf1Q80UV9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Taf1Q80UV9 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.28■□□□□ 0.84
Taf1Q80UV9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Taf1Q80UV9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Taf1Q80UV9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Taf1Q80UV9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Taf1Q80UV9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.28■□□□□ 0.84
Taf1Q80UV9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.28■□□□□ 0.84
Taf1Q80UV9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Taf1Q80UV9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Taf1Q80UV9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1Q80UV9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1Q80UV9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1Q80UV9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Taf1Q80UV9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1Q80UV9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Taf1Q80UV9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1Q80UV9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Taf1Q80UV9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Taf1Q80UV9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Trmt13-210ENSMUST00000198454 880 ntBASIC20.26■□□□□ 0.83
Taf1Q80UV9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Taf1Q80UV9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Taf1Q80UV9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Taf1Q80UV9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.24■□□□□ 0.83
Taf1Q80UV9 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.24■□□□□ 0.83
Taf1Q80UV9 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.24■□□□□ 0.83
Taf1Q80UV9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1Q80UV9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.24■□□□□ 0.83
Taf1Q80UV9 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.24■□□□□ 0.83
Taf1Q80UV9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Taf1Q80UV9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.23■□□□□ 0.83
Taf1Q80UV9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Taf1Q80UV9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Taf1Q80UV9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.23■□□□□ 0.83
Taf1Q80UV9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.23■□□□□ 0.83
Taf1Q80UV9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Gm13168-201ENSMUST00000121771 632 ntBASIC20.22■□□□□ 0.83
Taf1Q80UV9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Taf1Q80UV9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Taf1Q80UV9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1Q80UV9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Taf1Q80UV9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms