Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Sh3d21Q7TSG5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Sh3d21Q7TSG5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3d21Q7TSG5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3d21Q7TSG5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3d21Q7TSG5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3d21Q7TSG5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3d21Q7TSG5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3d21Q7TSG5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.58■□□□□ 0.88
Sh3d21Q7TSG5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.58■□□□□ 0.88
Sh3d21Q7TSG5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3d21Q7TSG5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Reep4-203ENSMUST00000226563 1444 ntBASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.56■□□□□ 0.88
Sh3d21Q7TSG5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3d21Q7TSG5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3d21Q7TSG5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3d21Q7TSG5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sh3d21Q7TSG5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3d21Q7TSG5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3d21Q7TSG5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3d21Q7TSG5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3d21Q7TSG5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Gm42778-201ENSMUST00000199644 553 ntBASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3d21Q7TSG5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Gm10493-201ENSMUST00000097270 612 ntBASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d21Q7TSG5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d21Q7TSG5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d21Q7TSG5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.52■□□□□ 0.88
Sh3d21Q7TSG5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d21Q7TSG5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Sh3d21Q7TSG5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.52■□□□□ 0.88
Sh3d21Q7TSG5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d21Q7TSG5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d21Q7TSG5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d21Q7TSG5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3d21Q7TSG5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3d21Q7TSG5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3d21Q7TSG5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d21Q7TSG5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms