Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Ubfd1Q78JW9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.33■□□□□ 0.53
Ubfd1Q78JW9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubfd1Q78JW9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubfd1Q78JW9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubfd1Q78JW9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubfd1Q78JW9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Rab3c-203ENSMUST00000224180 967 ntBASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubfd1Q78JW9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubfd1Q78JW9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubfd1Q78JW9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubfd1Q78JW9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubfd1Q78JW9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubfd1Q78JW9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubfd1Q78JW9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubfd1Q78JW9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubfd1Q78JW9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubfd1Q78JW9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubfd1Q78JW9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubfd1Q78JW9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubfd1Q78JW9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubfd1Q78JW9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ubfd1Q78JW9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubfd1Q78JW9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubfd1Q78JW9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubfd1Q78JW9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubfd1Q78JW9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubfd1Q78JW9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms