Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Gm12441-201ENSMUST00000121806 588 ntBASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Shc4Q6S5L9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Shc4Q6S5L9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Nespas-201ENSMUST00000143738 1083 ntBASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Iqck-206ENSMUST00000208658 2891 ntBASIC17.54■□□□□ 0.4
Shc4Q6S5L9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.53■□□□□ 0.4
Shc4Q6S5L9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shc4Q6S5L9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Shc4Q6S5L9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shc4Q6S5L9 Gm7860-201ENSMUST00000121190 879 ntBASIC17.52■□□□□ 0.4
Shc4Q6S5L9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Shc4Q6S5L9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Shc4Q6S5L9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shc4Q6S5L9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Shc4Q6S5L9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shc4Q6S5L9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shc4Q6S5L9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shc4Q6S5L9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Shc4Q6S5L9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Shc4Q6S5L9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.5■□□□□ 0.39
Shc4Q6S5L9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shc4Q6S5L9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shc4Q6S5L9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shc4Q6S5L9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Shc4Q6S5L9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shc4Q6S5L9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.49■□□□□ 0.39
Shc4Q6S5L9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shc4Q6S5L9 Gm4968-201ENSMUST00000071458 858 ntBASIC17.49■□□□□ 0.39
Shc4Q6S5L9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Shc4Q6S5L9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms