Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Hmgb4Q6P8W9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hmgb4Q6P8W9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmgb4Q6P8W9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hmgb4Q6P8W9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Hmgb4Q6P8W9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Gm13534-201ENSMUST00000121169 513 ntBASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hmgb4Q6P8W9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hmgb4Q6P8W9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Gm7290-201ENSMUST00000104990 617 ntBASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Gm12918-201ENSMUST00000120234 636 ntBASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Gm15710-201ENSMUST00000121821 636 ntBASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Gm5075-201ENSMUST00000196916 622 ntBASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hmgb4Q6P8W9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hmgb4Q6P8W9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgb4Q6P8W9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgb4Q6P8W9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgb4Q6P8W9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.6■□□□□ 0.73
Hmgb4Q6P8W9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgb4Q6P8W9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgb4Q6P8W9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.6■□□□□ 0.73
Hmgb4Q6P8W9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgb4Q6P8W9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hmgb4Q6P8W9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Gm7860-201ENSMUST00000121190 879 ntBASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Golph3-205ENSMUST00000228671 2842 ntBASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hmgb4Q6P8W9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hmgb4Q6P8W9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms