Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rtl3Q6P1Y1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtl3Q6P1Y1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtl3Q6P1Y1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rtl3Q6P1Y1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Nespas-201ENSMUST00000143738 1083 ntBASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Gm6420-201ENSMUST00000193885 723 ntBASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtl3Q6P1Y1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rtl3Q6P1Y1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtl3Q6P1Y1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtl3Q6P1Y1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtl3Q6P1Y1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtl3Q6P1Y1 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.37■□□□□ 0.69
Rtl3Q6P1Y1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.37■□□□□ 0.69
Rtl3Q6P1Y1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtl3Q6P1Y1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl3Q6P1Y1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl3Q6P1Y1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl3Q6P1Y1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl3Q6P1Y1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.36■□□□□ 0.69
Rtl3Q6P1Y1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rtl3Q6P1Y1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl3Q6P1Y1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl3Q6P1Y1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtl3Q6P1Y1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rtl3Q6P1Y1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms