Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Gm9847-201ENSMUST00000052528 599 ntBASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scube1Q6NZL8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scube1Q6NZL8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scube1Q6NZL8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.05■□□□□ 0.48
Scube1Q6NZL8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scube1Q6NZL8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Scube1Q6NZL8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.04■□□□□ 0.48
Scube1Q6NZL8 Gm13241-201ENSMUST00000094493 780 ntBASIC18.04■□□□□ 0.48
Scube1Q6NZL8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.04■□□□□ 0.48
Scube1Q6NZL8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Scube1Q6NZL8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scube1Q6NZL8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scube1Q6NZL8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.03■□□□□ 0.48
Scube1Q6NZL8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.03■□□□□ 0.48
Scube1Q6NZL8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scube1Q6NZL8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scube1Q6NZL8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scube1Q6NZL8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scube1Q6NZL8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scube1Q6NZL8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.02■□□□□ 0.48
Scube1Q6NZL8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scube1Q6NZL8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.02■□□□□ 0.48
Scube1Q6NZL8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scube1Q6NZL8 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.02■□□□□ 0.47
Scube1Q6NZL8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scube1Q6NZL8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms