Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retreg2Q6NS82 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retreg2Q6NS82 Gm13234-201ENSMUST00000120010 747 ntBASIC20.17■□□□□ 0.82
Retreg2Q6NS82 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg2Q6NS82 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Retreg2Q6NS82 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retreg2Q6NS82 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.17■□□□□ 0.82
Retreg2Q6NS82 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retreg2Q6NS82 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.15■□□□□ 0.82
Retreg2Q6NS82 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Retreg2Q6NS82 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Retreg2Q6NS82 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retreg2Q6NS82 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retreg2Q6NS82 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms