Protein–RNA interactions for Protein: Q64253

Ly6e, Lymphocyte antigen 6E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6eQ64253 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.36■□□□□ 0.37
Ly6eQ64253 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Golph3-202ENSMUST00000226517 2359 ntBASIC17.36■□□□□ 0.37
Ly6eQ64253 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.36■□□□□ 0.37
Ly6eQ64253 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.36■□□□□ 0.37
Ly6eQ64253 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ly6eQ64253 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ly6eQ64253 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ly6eQ64253 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.35■□□□□ 0.37
Ly6eQ64253 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ly6eQ64253 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ly6eQ64253 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ly6eQ64253 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.35■□□□□ 0.37
Ly6eQ64253 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Ly6eQ64253 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ly6eQ64253 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ly6eQ64253 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ly6eQ64253 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ly6eQ64253 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ly6eQ64253 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ly6eQ64253 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ly6eQ64253 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ly6eQ64253 Gm13148-201ENSMUST00000118892 745 ntBASIC17.34■□□□□ 0.37
Ly6eQ64253 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ly6eQ64253 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ly6eQ64253 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.34■□□□□ 0.37
Ly6eQ64253 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ly6eQ64253 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.34■□□□□ 0.37
Ly6eQ64253 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.34■□□□□ 0.37
Ly6eQ64253 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ly6eQ64253 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ly6eQ64253 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ly6eQ64253 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ly6eQ64253 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ly6eQ64253 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ly6eQ64253 Gm7290-201ENSMUST00000104990 617 ntBASIC17.33■□□□□ 0.36
Ly6eQ64253 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ly6eQ64253 Gm12918-201ENSMUST00000120234 636 ntBASIC17.33■□□□□ 0.36
Ly6eQ64253 Gm15710-201ENSMUST00000121821 636 ntBASIC17.33■□□□□ 0.36
Ly6eQ64253 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Ly6eQ64253 Gm5075-201ENSMUST00000196916 622 ntBASIC17.33■□□□□ 0.36
Ly6eQ64253 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ly6eQ64253 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ly6eQ64253 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.33■□□□□ 0.36
Ly6eQ64253 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.33■□□□□ 0.36
Ly6eQ64253 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
Ly6eQ64253 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.33■□□□□ 0.36
Ly6eQ64253 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ly6eQ64253 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.33■□□□□ 0.36
Ly6eQ64253 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ly6eQ64253 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ly6eQ64253 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ly6eQ64253 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.32■□□□□ 0.36
Ly6eQ64253 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.32■□□□□ 0.36
Ly6eQ64253 Gm27011-201ENSMUST00000182352 972 ntBASIC17.32■□□□□ 0.36
Ly6eQ64253 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ly6eQ64253 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ly6eQ64253 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ly6eQ64253 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ly6eQ64253 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.31■□□□□ 0.36
Ly6eQ64253 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.31■□□□□ 0.36
Ly6eQ64253 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ly6eQ64253 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ly6eQ64253 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.3■□□□□ 0.36
Ly6eQ64253 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ly6eQ64253 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms