Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rai1Q61818 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rai1Q61818 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rai1Q61818 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rai1Q61818 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rai1Q61818 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.31■□□□□ 0.52
Rai1Q61818 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rai1Q61818 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rai1Q61818 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rai1Q61818 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rai1Q61818 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rai1Q61818 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rai1Q61818 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rai1Q61818 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.31■□□□□ 0.52
Rai1Q61818 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rai1Q61818 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rai1Q61818 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rai1Q61818 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rai1Q61818 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Rai1Q61818 Mir5122-201ENSMUST00000175004 89 ntBASIC18.31■□□□□ 0.52
Rai1Q61818 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rai1Q61818 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rai1Q61818 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rai1Q61818 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rai1Q61818 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rai1Q61818 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rai1Q61818 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rai1Q61818 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rai1Q61818 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rai1Q61818 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rai1Q61818 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.29■□□□□ 0.52
Rai1Q61818 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rai1Q61818 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rai1Q61818 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.29■□□□□ 0.52
Rai1Q61818 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.29■□□□□ 0.52
Rai1Q61818 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rai1Q61818 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rai1Q61818 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rai1Q61818 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rai1Q61818 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rai1Q61818 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rai1Q61818 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rai1Q61818 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rai1Q61818 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.28■□□□□ 0.52
Rai1Q61818 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.28■□□□□ 0.52
Rai1Q61818 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.28■□□□□ 0.52
Rai1Q61818 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.28■□□□□ 0.52
Rai1Q61818 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.28■□□□□ 0.52
Rai1Q61818 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rai1Q61818 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rai1Q61818 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.27■□□□□ 0.52
Rai1Q61818 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.27■□□□□ 0.52
Rai1Q61818 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Rai1Q61818 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.27■□□□□ 0.52
Rai1Q61818 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.27■□□□□ 0.52
Rai1Q61818 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rai1Q61818 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rai1Q61818 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rai1Q61818 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.27■□□□□ 0.51
Rai1Q61818 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.26■□□□□ 0.51
Rai1Q61818 Gm15378-201ENSMUST00000121894 207 ntBASIC18.26■□□□□ 0.51
Rai1Q61818 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.26■□□□□ 0.51
Rai1Q61818 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.26■□□□□ 0.51
Rai1Q61818 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rai1Q61818 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rai1Q61818 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rai1Q61818 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rai1Q61818 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rai1Q61818 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Rai1Q61818 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.26■□□□□ 0.51
Rai1Q61818 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Rai1Q61818 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rai1Q61818 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rai1Q61818 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rai1Q61818 Gm11927-201ENSMUST00000118472 759 ntBASIC18.25■□□□□ 0.51
Rai1Q61818 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.25■□□□□ 0.51
Rai1Q61818 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rai1Q61818 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rai1Q61818 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rai1Q61818 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rai1Q61818 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rai1Q61818 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.24■□□□□ 0.51
Rai1Q61818 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.24■□□□□ 0.51
Rai1Q61818 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rai1Q61818 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rai1Q61818 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rai1Q61818 Gm11643-201ENSMUST00000119578 864 ntBASIC18.24■□□□□ 0.51
Rai1Q61818 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.24■□□□□ 0.51
Rai1Q61818 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rai1Q61818 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rai1Q61818 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms