Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Gm6211-202ENSMUST00000167849 925 ntBASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Gm5408-201ENSMUST00000197998 747 ntBASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav2Q5R1I9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav2Q5R1I9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav2Q5R1I9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav2Q5R1I9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trav2Q5R1I9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trav2Q5R1I9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav2Q5R1I9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav2Q5R1I9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav2Q5R1I9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav2Q5R1I9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav2Q5R1I9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav2Q5R1I9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav2Q5R1I9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav2Q5R1I9 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Gm12441-201ENSMUST00000121806 588 ntBASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav2Q5R1I9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trav2Q5R1I9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms