Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Gm27801-201ENSMUST00000184174 223 ntBASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-3Q5R1E6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Mir7075-201ENSMUST00000184187 82 ntBASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-3Q5R1E6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Gm21956-201ENSMUST00000179946 522 ntBASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.09■□□□□ 0.01
Trav6-3Q5R1E6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6-3Q5R1E6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6-3Q5R1E6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Gm43173-201ENSMUST00000202246 593 ntBASIC15.08■□□□□ 0
Trav6-3Q5R1E6 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.08■□□□□ 0
Trav6-3Q5R1E6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-3Q5R1E6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-3Q5R1E6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Gm8493-201ENSMUST00000196881 489 ntBASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-3Q5R1E6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav6-3Q5R1E6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-3Q5R1E6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.05■□□□□ 0
Trav6-3Q5R1E6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav6-3Q5R1E6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-3Q5R1E6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-3Q5R1E6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-3Q5R1E6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-3Q5R1E6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav6-3Q5R1E6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms