Protein–RNA interactions for Protein: Q3V0S8

1700012B07Rik, MCG19638, isoform CRA_b, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700012B07RikQ3V0S8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
1700012B07RikQ3V0S8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Nespas-201ENSMUST00000143738 1083 ntBASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
1700012B07RikQ3V0S8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Iqck-206ENSMUST00000208658 2891 ntBASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
1700012B07RikQ3V0S8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
1700012B07RikQ3V0S8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
1700012B07RikQ3V0S8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
1700012B07RikQ3V0S8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
1700012B07RikQ3V0S8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
1700012B07RikQ3V0S8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms