Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.31■□□□□ 0.52
Rnf223Q3UV31 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Gm26524-201ENSMUST00000192339 390 ntBASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf223Q3UV31 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf223Q3UV31 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf223Q3UV31 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf223Q3UV31 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf223Q3UV31 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf223Q3UV31 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Rnf223Q3UV31 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.29■□□□□ 0.52
Rnf223Q3UV31 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf223Q3UV31 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf223Q3UV31 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.29■□□□□ 0.52
Rnf223Q3UV31 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf223Q3UV31 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf223Q3UV31 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf223Q3UV31 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf223Q3UV31 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Rnf223Q3UV31 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 Gm12527-201ENSMUST00000117967 564 ntBASIC18.26■□□□□ 0.51
Rnf223Q3UV31 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.26■□□□□ 0.51
Rnf223Q3UV31 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf223Q3UV31 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Rnf223Q3UV31 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms