Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf44Q3UHJ8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf44Q3UHJ8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Gm27405-201ENSMUST00000184201 112 ntBASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.16■□□□□ 0.5
Rnf44Q3UHJ8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Gm7514-201ENSMUST00000209475 934 ntBASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf44Q3UHJ8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf44Q3UHJ8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Rnf44Q3UHJ8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf44Q3UHJ8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Gm7291-201ENSMUST00000199147 382 ntBASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf44Q3UHJ8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf44Q3UHJ8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf44Q3UHJ8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf44Q3UHJ8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf44Q3UHJ8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.11■□□□□ 0.49
Rnf44Q3UHJ8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.11■□□□□ 0.49
Rnf44Q3UHJ8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf44Q3UHJ8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms