Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Golph3-202ENSMUST00000226517 2359 ntBASIC20.43■□□□□ 0.86
Snx27Q3UHD6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snx27Q3UHD6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Snx27Q3UHD6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Snx27Q3UHD6 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.39■□□□□ 0.86
Snx27Q3UHD6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.39■□□□□ 0.86
Snx27Q3UHD6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Gm20760-201ENSMUST00000179197 648 ntBASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Snx27Q3UHD6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snx27Q3UHD6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Snx27Q3UHD6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Gm37856-201ENSMUST00000191634 999 ntBASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snx27Q3UHD6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms