Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rapgef1Q3UHC1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rapgef1Q3UHC1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rapgef1Q3UHC1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rapgef1Q3UHC1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rapgef1Q3UHC1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rapgef1Q3UHC1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 Gm42778-201ENSMUST00000199644 553 ntBASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rapgef1Q3UHC1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rapgef1Q3UHC1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rapgef1Q3UHC1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rapgef1Q3UHC1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rapgef1Q3UHC1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rapgef1Q3UHC1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.45■□□□□ 0.86
Rapgef1Q3UHC1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rapgef1Q3UHC1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rapgef1Q3UHC1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rapgef1Q3UHC1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rapgef1Q3UHC1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rapgef1Q3UHC1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms