Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Spg11Q3UHA3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.51■□□□□ 0.39
Spg11Q3UHA3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Spg11Q3UHA3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Spg11Q3UHA3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Spg11Q3UHA3 AW822252-206ENSMUST00000208904 237 ntBASIC17.51■□□□□ 0.39
Spg11Q3UHA3 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.51■□□□□ 0.39
Spg11Q3UHA3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Spg11Q3UHA3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Gm42545-201ENSMUST00000202755 922 ntBASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Gm18669-201ENSMUST00000216049 778 ntBASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Spg11Q3UHA3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Spg11Q3UHA3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.48■□□□□ 0.39
Spg11Q3UHA3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Gm27704-201ENSMUST00000185094 107 ntBASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Spg11Q3UHA3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Spg11Q3UHA3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Spg11Q3UHA3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.46■□□□□ 0.38
Spg11Q3UHA3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.46■□□□□ 0.38
Spg11Q3UHA3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Spg11Q3UHA3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 AA386476-201ENSMUST00000098781 1665 ntBASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Flg-201ENSMUST00000050758 1488 ntBASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Gm22697-201ENSMUST00000175194 63 ntBASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Spg11Q3UHA3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Spg11Q3UHA3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Spg11Q3UHA3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.44■□□□□ 0.38
Spg11Q3UHA3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Spg11Q3UHA3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.44■□□□□ 0.38
Spg11Q3UHA3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms