Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.84■□□□□ 0.61
Cdkl4Q3TZA2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cdkl4Q3TZA2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdkl4Q3TZA2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdkl4Q3TZA2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.83■□□□□ 0.61
Cdkl4Q3TZA2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Cdkl4Q3TZA2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.83■□□□□ 0.61
Cdkl4Q3TZA2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdkl4Q3TZA2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.83■□□□□ 0.6
Cdkl4Q3TZA2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkl4Q3TZA2 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.83■□□□□ 0.6
Cdkl4Q3TZA2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.83■□□□□ 0.6
Cdkl4Q3TZA2 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.83■□□□□ 0.6
Cdkl4Q3TZA2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cdkl4Q3TZA2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkl4Q3TZA2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkl4Q3TZA2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdkl4Q3TZA2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdkl4Q3TZA2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkl4Q3TZA2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkl4Q3TZA2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.8■□□□□ 0.6
Cdkl4Q3TZA2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.8■□□□□ 0.6
Cdkl4Q3TZA2 Iqck-206ENSMUST00000208658 2891 ntBASIC18.8■□□□□ 0.6
Cdkl4Q3TZA2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.8■□□□□ 0.6
Cdkl4Q3TZA2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdkl4Q3TZA2 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.8■□□□□ 0.6
Cdkl4Q3TZA2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdkl4Q3TZA2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdkl4Q3TZA2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdkl4Q3TZA2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms