Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col19a1Q0VF58 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.28■□□□□ 0.84
Col19a1Q0VF58 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col19a1Q0VF58 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col19a1Q0VF58 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.28■□□□□ 0.84
Col19a1Q0VF58 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col19a1Q0VF58 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Col19a1Q0VF58 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col19a1Q0VF58 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col19a1Q0VF58 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col19a1Q0VF58 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col19a1Q0VF58 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col19a1Q0VF58 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col19a1Q0VF58 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.27■□□□□ 0.84
Col19a1Q0VF58 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Col19a1Q0VF58 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.27■□□□□ 0.84
Col19a1Q0VF58 Mtag2-201ENSMUST00000058665 714 ntBASIC20.27■□□□□ 0.84
Col19a1Q0VF58 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col19a1Q0VF58 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Col19a1Q0VF58 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col19a1Q0VF58 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Col19a1Q0VF58 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col19a1Q0VF58 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Col19a1Q0VF58 Gm6345-202ENSMUST00000180900 204 ntBASIC20.26■□□□□ 0.83
Col19a1Q0VF58 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col19a1Q0VF58 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.26■□□□□ 0.83
Col19a1Q0VF58 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.26■□□□□ 0.83
Col19a1Q0VF58 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col19a1Q0VF58 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col19a1Q0VF58 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Flg-201ENSMUST00000050758 1488 ntBASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col19a1Q0VF58 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col19a1Q0VF58 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col19a1Q0VF58 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Col19a1Q0VF58 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col19a1Q0VF58 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col19a1Q0VF58 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col19a1Q0VF58 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col19a1Q0VF58 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col19a1Q0VF58 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Gm9103-201ENSMUST00000119371 405 ntBASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Gm33142-201ENSMUST00000193913 867 ntBASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.23■□□□□ 0.83
Col19a1Q0VF58 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Gm10013-201ENSMUST00000106074 672 ntBASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.22■□□□□ 0.83
Col19a1Q0VF58 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col19a1Q0VF58 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col19a1Q0VF58 Ank2-226ENSMUST00000189368 339 ntBASIC20.21■□□□□ 0.83
Col19a1Q0VF58 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col19a1Q0VF58 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col19a1Q0VF58 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col19a1Q0VF58 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col19a1Q0VF58 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.21■□□□□ 0.83
Col19a1Q0VF58 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col19a1Q0VF58 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Gm3375-201ENSMUST00000203929 796 ntBASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Col19a1Q0VF58 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col19a1Q0VF58 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms