Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Ptchd3Q0EEE2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ptchd3Q0EEE2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptchd3Q0EEE2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptchd3Q0EEE2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.13■□□□□ 0.49
Ptchd3Q0EEE2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ptchd3Q0EEE2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ptchd3Q0EEE2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ptchd3Q0EEE2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ptchd3Q0EEE2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ptchd3Q0EEE2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ptchd3Q0EEE2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ptchd3Q0EEE2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.09■□□□□ 0.49
Ptchd3Q0EEE2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ptchd3Q0EEE2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.09■□□□□ 0.49
Ptchd3Q0EEE2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ptchd3Q0EEE2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ptchd3Q0EEE2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Ptchd3Q0EEE2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ptchd3Q0EEE2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ptchd3Q0EEE2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ptchd3Q0EEE2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
Ptchd3Q0EEE2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ptchd3Q0EEE2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ptchd3Q0EEE2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.08■□□□□ 0.48
Ptchd3Q0EEE2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Ptchd3Q0EEE2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ptchd3Q0EEE2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ptchd3Q0EEE2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Ptchd3Q0EEE2 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.08■□□□□ 0.48
Ptchd3Q0EEE2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ptchd3Q0EEE2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Gm43137-201ENSMUST00000198052 594 ntBASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ptchd3Q0EEE2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms