Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
IhhP97812 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.62■□□□□ 0.73
IhhP97812 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
IhhP97812 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.62■□□□□ 0.73
IhhP97812 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
IhhP97812 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.62■□□□□ 0.73
IhhP97812 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
IhhP97812 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
IhhP97812 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IhhP97812 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IhhP97812 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IhhP97812 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IhhP97812 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IhhP97812 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
IhhP97812 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.61■□□□□ 0.73
IhhP97812 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.61■□□□□ 0.73
IhhP97812 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.61■□□□□ 0.73
IhhP97812 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IhhP97812 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IhhP97812 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
IhhP97812 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.61■□□□□ 0.73
IhhP97812 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.6■□□□□ 0.73
IhhP97812 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.6■□□□□ 0.73
IhhP97812 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
IhhP97812 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IhhP97812 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
IhhP97812 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.59■□□□□ 0.73
IhhP97812 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
IhhP97812 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
IhhP97812 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
IhhP97812 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IhhP97812 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
IhhP97812 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IhhP97812 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
IhhP97812 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
IhhP97812 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
IhhP97812 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IhhP97812 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
IhhP97812 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IhhP97812 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
IhhP97812 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
IhhP97812 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
IhhP97812 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IhhP97812 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
IhhP97812 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
IhhP97812 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
IhhP97812 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
IhhP97812 Iqck-206ENSMUST00000208658 2891 ntBASIC19.57■□□□□ 0.72
IhhP97812 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
IhhP97812 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IhhP97812 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IhhP97812 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.57■□□□□ 0.72
IhhP97812 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Gm4968-201ENSMUST00000071458 858 ntBASIC19.57■□□□□ 0.72
IhhP97812 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
IhhP97812 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms