Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43cP86449 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Trim43cP86449 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43cP86449 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim43cP86449 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Gm18284-201ENSMUST00000172604 624 ntBASIC20.54■□□□□ 0.88
Trim43cP86449 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.54■□□□□ 0.88
Trim43cP86449 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.54■□□□□ 0.88
Trim43cP86449 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim43cP86449 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43cP86449 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Trim43cP86449 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
Trim43cP86449 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim43cP86449 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim43cP86449 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim43cP86449 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim43cP86449 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim43cP86449 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.53■□□□□ 0.88
Trim43cP86449 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.53■□□□□ 0.88
Trim43cP86449 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43cP86449 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43cP86449 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43cP86449 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43cP86449 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim43cP86449 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43cP86449 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim43cP86449 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43cP86449 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43cP86449 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43cP86449 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim43cP86449 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim43cP86449 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim43cP86449 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim43cP86449 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.52■□□□□ 0.87
Trim43cP86449 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trim43cP86449 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.52■□□□□ 0.87
Trim43cP86449 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.51■□□□□ 0.87
Trim43cP86449 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Gm10849-201ENSMUST00000100397 618 ntBASIC20.51■□□□□ 0.87
Trim43cP86449 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim43cP86449 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim43cP86449 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.51■□□□□ 0.87
Trim43cP86449 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim43cP86449 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim43cP86449 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.5■□□□□ 0.87
Trim43cP86449 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim43cP86449 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim43cP86449 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43cP86449 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43cP86449 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.49■□□□□ 0.87
Trim43cP86449 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.49■□□□□ 0.87
Trim43cP86449 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43cP86449 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim43cP86449 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43cP86449 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43cP86449 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim43cP86449 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43cP86449 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trim43cP86449 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim43cP86449 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trim43cP86449 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms