Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ldb1P70662 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.74■□□□□ 0.59
Ldb1P70662 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Gm9988-201ENSMUST00000069786 435 ntBASIC18.74■□□□□ 0.59
Ldb1P70662 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ldb1P70662 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.74■□□□□ 0.59
Ldb1P70662 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.74■□□□□ 0.59
Ldb1P70662 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ldb1P70662 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.73■□□□□ 0.59
Ldb1P70662 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ldb1P70662 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ldb1P70662 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ldb1P70662 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.73■□□□□ 0.59
Ldb1P70662 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.73■□□□□ 0.59
Ldb1P70662 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Ldb1P70662 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ldb1P70662 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ldb1P70662 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ldb1P70662 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ldb1P70662 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ldb1P70662 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ldb1P70662 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ldb1P70662 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ldb1P70662 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ldb1P70662 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ldb1P70662 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.72■□□□□ 0.59
Ldb1P70662 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ldb1P70662 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ldb1P70662 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ldb1P70662 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ldb1P70662 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ldb1P70662 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.71■□□□□ 0.59
Ldb1P70662 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ldb1P70662 Reep4-203ENSMUST00000226563 1444 ntBASIC18.71■□□□□ 0.59
Ldb1P70662 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ldb1P70662 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ldb1P70662 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ldb1P70662 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ldb1P70662 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ldb1P70662 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ldb1P70662 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ldb1P70662 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ldb1P70662 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ldb1P70662 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ldb1P70662 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ldb1P70662 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ldb1P70662 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ldb1P70662 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ldb1P70662 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ldb1P70662 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.7■□□□□ 0.58
Ldb1P70662 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ldb1P70662 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ldb1P70662 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.69■□□□□ 0.58
Ldb1P70662 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ldb1P70662 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ldb1P70662 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.69■□□□□ 0.58
Ldb1P70662 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.68■□□□□ 0.58
Ldb1P70662 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.68■□□□□ 0.58
Ldb1P70662 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.68■□□□□ 0.58
Ldb1P70662 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.68■□□□□ 0.58
Ldb1P70662 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ldb1P70662 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ldb1P70662 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ldb1P70662 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb1P70662 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ldb1P70662 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ldb1P70662 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ldb1P70662 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
Ldb1P70662 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms