Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Crnkl1P63154 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Crnkl1P63154 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Crnkl1P63154 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Crnkl1P63154 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.58■□□□□ 0.56
Crnkl1P63154 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Crnkl1P63154 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.58■□□□□ 0.56
Crnkl1P63154 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Crnkl1P63154 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Crnkl1P63154 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Crnkl1P63154 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Crnkl1P63154 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.57■□□□□ 0.56
Crnkl1P63154 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Crnkl1P63154 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Crnkl1P63154 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Crnkl1P63154 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Crnkl1P63154 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Crnkl1P63154 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.57■□□□□ 0.56
Crnkl1P63154 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Crnkl1P63154 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Crnkl1P63154 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Crnkl1P63154 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Crnkl1P63154 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Crnkl1P63154 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.56■□□□□ 0.56
Crnkl1P63154 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Crnkl1P63154 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.56■□□□□ 0.56
Crnkl1P63154 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Crnkl1P63154 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Crnkl1P63154 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Crnkl1P63154 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.55■□□□□ 0.56
Crnkl1P63154 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Crnkl1P63154 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.55■□□□□ 0.56
Crnkl1P63154 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Crnkl1P63154 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.55■□□□□ 0.56
Crnkl1P63154 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Crnkl1P63154 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Crnkl1P63154 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.54■□□□□ 0.56
Crnkl1P63154 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.54■□□□□ 0.56
Crnkl1P63154 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.54■□□□□ 0.56
Crnkl1P63154 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Crnkl1P63154 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.54■□□□□ 0.56
Crnkl1P63154 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Crnkl1P63154 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Crnkl1P63154 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Crnkl1P63154 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Crnkl1P63154 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Crnkl1P63154 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.53■□□□□ 0.56
Crnkl1P63154 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.53■□□□□ 0.56
Crnkl1P63154 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Crnkl1P63154 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Crnkl1P63154 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Crnkl1P63154 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Crnkl1P63154 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Crnkl1P63154 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.53■□□□□ 0.56
Crnkl1P63154 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Crnkl1P63154 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Crnkl1P63154 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Crnkl1P63154 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Crnkl1P63154 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Crnkl1P63154 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Crnkl1P63154 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Crnkl1P63154 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Crnkl1P63154 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms