Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ybx1P62960 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ybx1P62960 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ybx1P62960 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.35■□□□□ 0.69
Ybx1P62960 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ybx1P62960 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ybx1P62960 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.35■□□□□ 0.69
Ybx1P62960 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ybx1P62960 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ybx1P62960 Mir6982-201ENSMUST00000184354 68 ntBASIC19.35■□□□□ 0.69
Ybx1P62960 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ybx1P62960 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ybx1P62960 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ybx1P62960 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ybx1P62960 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Ybx1P62960 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ybx1P62960 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ybx1P62960 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.34■□□□□ 0.69
Ybx1P62960 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ybx1P62960 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ybx1P62960 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.34■□□□□ 0.69
Ybx1P62960 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.34■□□□□ 0.69
Ybx1P62960 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ybx1P62960 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ybx1P62960 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ybx1P62960 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.33■□□□□ 0.69
Ybx1P62960 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ybx1P62960 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ybx1P62960 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ybx1P62960 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ybx1P62960 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ybx1P62960 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ybx1P62960 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ybx1P62960 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.33■□□□□ 0.68
Ybx1P62960 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ybx1P62960 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Ybx1P62960 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ybx1P62960 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ybx1P62960 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ybx1P62960 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ybx1P62960 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.32■□□□□ 0.68
Ybx1P62960 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.32■□□□□ 0.68
Ybx1P62960 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ybx1P62960 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ybx1P62960 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ybx1P62960 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ybx1P62960 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ybx1P62960 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Ybx1P62960 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ybx1P62960 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ybx1P62960 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.31■□□□□ 0.68
Ybx1P62960 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ybx1P62960 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ybx1P62960 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ybx1P62960 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ybx1P62960 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ybx1P62960 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ybx1P62960 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ybx1P62960 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ybx1P62960 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ybx1P62960 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ybx1P62960 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ybx1P62960 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.3■□□□□ 0.68
Ybx1P62960 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ybx1P62960 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
Ybx1P62960 Gm5643-201ENSMUST00000117081 966 ntBASIC19.3■□□□□ 0.68
Ybx1P62960 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.3■□□□□ 0.68
Ybx1P62960 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.3■□□□□ 0.68
Ybx1P62960 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ybx1P62960 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ybx1P62960 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ybx1P62960 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ybx1P62960 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ybx1P62960 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ybx1P62960 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ybx1P62960 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ybx1P62960 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ybx1P62960 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ybx1P62960 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ybx1P62960 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ybx1P62960 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.29■□□□□ 0.68
Ybx1P62960 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ybx1P62960 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ybx1P62960 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ybx1P62960 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Ybx1P62960 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ybx1P62960 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ybx1P62960 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ybx1P62960 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ybx1P62960 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ybx1P62960 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ybx1P62960 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.28■□□□□ 0.68
Ybx1P62960 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.28■□□□□ 0.68
Ybx1P62960 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ybx1P62960 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ybx1P62960 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ybx1P62960 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ybx1P62960 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ybx1P62960 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ybx1P62960 Gm2559-201ENSMUST00000201323 363 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms