Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm43173-201ENSMUST00000202246 593 ntBASIC16.52■□□□□ 0.24
Sec61a1P61620 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.52■□□□□ 0.24
Sec61a1P61620 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sec61a1P61620 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Sec61a1P61620 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sec61a1P61620 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sec61a1P61620 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sec61a1P61620 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sec61a1P61620 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sec61a1P61620 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sec61a1P61620 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.51■□□□□ 0.23
Sec61a1P61620 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.51■□□□□ 0.23
Sec61a1P61620 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Sec61a1P61620 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.51■□□□□ 0.23
Sec61a1P61620 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Spcs1-204ENSMUST00000226782 949 ntBASIC16.51■□□□□ 0.23
Sec61a1P61620 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sec61a1P61620 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sec61a1P61620 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a1P61620 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a1P61620 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a1P61620 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sec61a1P61620 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a1P61620 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a1P61620 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a1P61620 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a1P61620 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.5■□□□□ 0.23
Sec61a1P61620 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a1P61620 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Sec61a1P61620 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a1P61620 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.49■□□□□ 0.23
Sec61a1P61620 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Sec61a1P61620 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.49■□□□□ 0.23
Sec61a1P61620 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.49■□□□□ 0.23
Sec61a1P61620 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sec61a1P61620 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a1P61620 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a1P61620 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sec61a1P61620 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a1P61620 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a1P61620 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a1P61620 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.48■□□□□ 0.23
Sec61a1P61620 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a1P61620 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a1P61620 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sec61a1P61620 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sec61a1P61620 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sec61a1P61620 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a1P61620 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.48■□□□□ 0.23
Sec61a1P61620 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a1P61620 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.47■□□□□ 0.23
Sec61a1P61620 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.47■□□□□ 0.23
Sec61a1P61620 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.47■□□□□ 0.23
Sec61a1P61620 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Sec61a1P61620 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a1P61620 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Sec61a1P61620 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Sec61a1P61620 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a1P61620 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 211.8 ms