Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1bP61025 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cks1bP61025 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cks1bP61025 Gm10620-201ENSMUST00000098379 1332 ntBASIC13.39□□□□□ -0.27
Cks1bP61025 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Cks1bP61025 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.39□□□□□ -0.27
Cks1bP61025 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.39□□□□□ -0.27
Cks1bP61025 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1bP61025 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cks1bP61025 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.38□□□□□ -0.27
Cks1bP61025 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cks1bP61025 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.38□□□□□ -0.27
Cks1bP61025 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.38□□□□□ -0.27
Cks1bP61025 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.38□□□□□ -0.27
Cks1bP61025 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.38□□□□□ -0.27
Cks1bP61025 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1bP61025 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cks1bP61025 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cks1bP61025 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.37□□□□□ -0.27
Cks1bP61025 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Cks1bP61025 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cks1bP61025 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cks1bP61025 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.37□□□□□ -0.27
Cks1bP61025 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1bP61025 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cks1bP61025 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Cks1bP61025 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cks1bP61025 Gm10399-202ENSMUST00000202768 748 ntBASIC13.36□□□□□ -0.27
Cks1bP61025 Gm45444-201ENSMUST00000211394 898 ntBASIC13.36□□□□□ -0.27
Cks1bP61025 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cks1bP61025 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cks1bP61025 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cks1bP61025 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1bP61025 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cks1bP61025 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1bP61025 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms