Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NrlP54846 Notumos-201ENSMUST00000151998 2659 ntBASIC20.07■□□□□ 0.8
NrlP54846 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NrlP54846 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NrlP54846 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NrlP54846 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NrlP54846 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NrlP54846 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NrlP54846 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NrlP54846 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NrlP54846 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NrlP54846 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NrlP54846 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NrlP54846 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NrlP54846 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NrlP54846 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NrlP54846 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NrlP54846 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
NrlP54846 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NrlP54846 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NrlP54846 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NrlP54846 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NrlP54846 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NrlP54846 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NrlP54846 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NrlP54846 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.04■□□□□ 0.8
NrlP54846 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NrlP54846 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NrlP54846 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NrlP54846 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.04■□□□□ 0.8
NrlP54846 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NrlP54846 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NrlP54846 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NrlP54846 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NrlP54846 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NrlP54846 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NrlP54846 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NrlP54846 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NrlP54846 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NrlP54846 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NrlP54846 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NrlP54846 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NrlP54846 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NrlP54846 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NrlP54846 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NrlP54846 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NrlP54846 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
NrlP54846 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
NrlP54846 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NrlP54846 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NrlP54846 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NrlP54846 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NrlP54846 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.02■□□□□ 0.79
NrlP54846 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NrlP54846 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NrlP54846 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NrlP54846 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
NrlP54846 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NrlP54846 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NrlP54846 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NrlP54846 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NrlP54846 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.01■□□□□ 0.79
NrlP54846 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NrlP54846 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NrlP54846 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.01■□□□□ 0.79
NrlP54846 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NrlP54846 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20■□□□□ 0.79
NrlP54846 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20■□□□□ 0.79
NrlP54846 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NrlP54846 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20■□□□□ 0.79
NrlP54846 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NrlP54846 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NrlP54846 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NrlP54846 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NrlP54846 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NrlP54846 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.99■□□□□ 0.79
NrlP54846 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.99■□□□□ 0.79
NrlP54846 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NrlP54846 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NrlP54846 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NrlP54846 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NrlP54846 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NrlP54846 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NrlP54846 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.99■□□□□ 0.79
NrlP54846 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NrlP54846 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NrlP54846 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NrlP54846 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.98■□□□□ 0.79
NrlP54846 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.98■□□□□ 0.79
NrlP54846 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.98■□□□□ 0.79
NrlP54846 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.98■□□□□ 0.79
NrlP54846 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.98■□□□□ 0.79
NrlP54846 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NrlP54846 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NrlP54846 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NrlP54846 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NrlP54846 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NrlP54846 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NrlP54846 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.98■□□□□ 0.79
NrlP54846 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms