Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rfx3P48381 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfx3P48381 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Rfx3P48381 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfx3P48381 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfx3P48381 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.95■□□□□ 0.3
Rfx3P48381 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rfx3P48381 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Rfx3P48381 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.95■□□□□ 0.3
Rfx3P48381 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.95■□□□□ 0.3
Rfx3P48381 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Grk6-206ENSMUST00000224995 2971 ntBASIC16.95■□□□□ 0.3
Rfx3P48381 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.95■□□□□ 0.3
Rfx3P48381 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfx3P48381 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx3P48381 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rfx3P48381 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.94■□□□□ 0.3
Rfx3P48381 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rfx3P48381 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.94■□□□□ 0.3
Rfx3P48381 Gm8493-201ENSMUST00000196881 489 ntBASIC16.94■□□□□ 0.3
Rfx3P48381 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfx3P48381 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Rfx3P48381 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx3P48381 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Rfx3P48381 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rfx3P48381 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Rfx3P48381 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.93■□□□□ 0.3
Rfx3P48381 Gm27454-201ENSMUST00000185090 204 ntBASIC16.93■□□□□ 0.3
Rfx3P48381 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.93■□□□□ 0.3
Rfx3P48381 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rfx3P48381 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx3P48381 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx3P48381 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rfx3P48381 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rfx3P48381 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.92■□□□□ 0.3
Rfx3P48381 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rfx3P48381 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.92■□□□□ 0.3
Rfx3P48381 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
Rfx3P48381 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx3P48381 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx3P48381 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx3P48381 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.91■□□□□ 0.3
Rfx3P48381 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfx3P48381 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx3P48381 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx3P48381 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx3P48381 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.91■□□□□ 0.3
Rfx3P48381 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx3P48381 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.91■□□□□ 0.3
Rfx3P48381 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx3P48381 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms