Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.36□□□□□ -0.43
Xcl1P47993 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.36□□□□□ -0.43
Xcl1P47993 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Xcl1P47993 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Xcl1P47993 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.36□□□□□ -0.43
Xcl1P47993 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Xcl1P47993 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.35□□□□□ -0.43
Xcl1P47993 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.35□□□□□ -0.43
Xcl1P47993 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Xcl1P47993 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC12.34□□□□□ -0.43
Xcl1P47993 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.34□□□□□ -0.43
Xcl1P47993 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.34□□□□□ -0.43
Xcl1P47993 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Xcl1P47993 Gm24804-201ENSMUST00000174982 85 ntBASIC12.34□□□□□ -0.43
Xcl1P47993 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Xcl1P47993 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Xcl1P47993 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Xcl1P47993 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.34□□□□□ -0.43
Xcl1P47993 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Xcl1P47993 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.34□□□□□ -0.43
Xcl1P47993 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Xcl1P47993 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Xcl1P47993 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Gm4799-201ENSMUST00000095396 657 ntBASIC12.33□□□□□ -0.44
Xcl1P47993 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Xcl1P47993 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Xcl1P47993 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Xcl1P47993 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.32□□□□□ -0.44
Xcl1P47993 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Xcl1P47993 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Xcl1P47993 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms