Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 YIL174WYIL174W 228 nt2.09□□□□□ -2.07
VPS55P47111 YJL222W-AYJL222W-A 228 nt2.09□□□□□ -2.07
VPS55P47111 RRT7YLL030C 342 nt2.09□□□□□ -2.07
VPS55P47111 UPS2YLR168C 693 nt2.09□□□□□ -2.07
VPS55P47111 YLR365WYLR365W 333 nt2.09□□□□□ -2.07
VPS55P47111 DGA1YOR245C 1257 nt2.09□□□□□ -2.07
VPS55P47111 YOR289WYOR289W 756 nt2.09□□□□□ -2.07
VPS55P47111 IRA2YOL081W 9240 nt2.09□□□□□ -2.08
VPS55P47111 PRP3YDR473C 1410 nt2.08□□□□□ -2.08
VPS55P47111 YCR045W-AYCR045W-A 351 nt2.08□□□□□ -2.08
VPS55P47111 RPS22AYJL190C 393 nt2.08□□□□□ -2.08
VPS55P47111 SED5YLR026C 1023 nt2.08□□□□□ -2.08
VPS55P47111 SSO2YMR183C 888 nt2.08□□□□□ -2.08
VPS55P47111 PEX11YOL147C 711 nt2.08□□□□□ -2.08
VPS55P47111 YPL073CYPL073C 486 nt2.08□□□□□ -2.08
VPS55P47111 MIC60YKR016W 1623 nt2.08□□□□□ -2.08
VPS55P47111 BUD6YLR319C 2367 nt2.08□□□□□ -2.08
VPS55P47111 EAF5YEL018W 840 nt2.07□□□□□ -2.08
VPS55P47111 SPT15YER148W 723 nt2.07□□□□□ -2.08
VPS55P47111 RPS23AYGR118W 438 nt2.07□□□□□ -2.08
VPS55P47111 ERV29YGR284C 933 nt2.07□□□□□ -2.08
VPS55P47111 YJL211CYJL211C 444 nt2.07□□□□□ -2.08
VPS55P47111 AFT2YPL202C 1251 nt2.07□□□□□ -2.08
VPS55P47111 RPS23BYPR132W 438 nt2.07□□□□□ -2.08
VPS55P47111 YLR001CYLR001C 2589 nt2.07□□□□□ -2.08
VPS55P47111 VAC14YLR386W 2643 nt2.07□□□□□ -2.08
VPS55P47111 AXL1YPR122W 3627 nt2.07□□□□□ -2.08
VPS55P47111 CCM1YGR150C 2595 nt2.06□□□□□ -2.08
VPS55P47111 AIM14YGL160W 1713 nt2.06□□□□□ -2.08
VPS55P47111 SEC26YDR238C 2922 nt2.06□□□□□ -2.08
VPS55P47111 MMS1YPR164W 4224 nt2.06□□□□□ -2.08
VPS55P47111 BUB1YGR188C 3066 nt2.06□□□□□ -2.08
VPS55P47111 YPP1YGR198W 2454 nt2.06□□□□□ -2.08
VPS55P47111 PRM15YMR278W 1869 nt2.06□□□□□ -2.08
VPS55P47111 CDC10YCR002C 969 nt2.06□□□□□ -2.08
VPS55P47111 GRX6YDL010W 696 nt2.06□□□□□ -2.08
VPS55P47111 RNR2YJL026W 1200 nt2.06□□□□□ -2.08
VPS55P47111 DCS1YLR270W 1053 nt2.06□□□□□ -2.08
VPS55P47111 VPS71YML041C 843 nt2.06□□□□□ -2.08
VPS55P47111 RPL23AYBL087C 414 nt2.06□□□□□ -2.08
VPS55P47111 PZF1YPR186C 1290 nt2.06□□□□□ -2.08
VPS55P47111 ARR1YPR199C 885 nt2.06□□□□□ -2.08
VPS55P47111 SAD1YFR005C 1347 nt2.06□□□□□ -2.08
VPS55P47111 NFT1YKR103W 3657 nt2.06□□□□□ -2.08
VPS55P47111 URC2YDR520C 2319 nt2.06□□□□□ -2.08
VPS55P47111 STP1YDR463W 1560 nt2.06□□□□□ -2.08
VPS55P47111 TRE2YOR256C 2430 nt2.06□□□□□ -2.08
VPS55P47111 PUF6YDR496C 1971 nt2.05□□□□□ -2.08
VPS55P47111 YJL132WYJL132W 2253 nt2.05□□□□□ -2.08
VPS55P47111 NAB3YPL190C 2409 nt2.05□□□□□ -2.08
VPS55P47111 PRM9YAR031W 897 nt2.05□□□□□ -2.08
VPS55P47111 AYT1YLL063C 1425 nt2.05□□□□□ -2.08
VPS55P47111 HYP2YEL034W 474 nt2.04□□□□□ -2.08
VPS55P47111 VHR2YER064C 1518 nt2.04□□□□□ -2.08
VPS55P47111 RPL14BYHL001W 417 nt2.04□□□□□ -2.08
VPS55P47111 ARC15YIL062C 465 nt2.04□□□□□ -2.08
VPS55P47111 YJR020WYJR020W 333 nt2.04□□□□□ -2.08
VPS55P47111 YKL066WYKL066W 444 nt2.04□□□□□ -2.08
VPS55P47111 YLR347W-AYLR347W-A 141 nt2.04□□□□□ -2.08
VPS55P47111 PDR3YBL005W 2931 nt2.04□□□□□ -2.08
VPS55P47111 MPP6YNR024W 561 nt2.04□□□□□ -2.08
VPS55P47111 SGS1YMR190C 4344 nt2.04□□□□□ -2.08
VPS55P47111 YKR078WYKR078W 1758 nt2.03□□□□□ -2.08
VPS55P47111 NAB6YML117W 3405 nt2.03□□□□□ -2.08
VPS55P47111 ICR1ICR1 3199 nt2.03□□□□□ -2.08
VPS55P47111 PEX6YNL329C 3093 nt2.03□□□□□ -2.08
VPS55P47111 YGR117CYGR117C 1431 nt2.03□□□□□ -2.08
VPS55P47111 PTP3YER075C 2787 nt2.03□□□□□ -2.08
VPS55P47111 SAW1YAL027W 786 nt2.03□□□□□ -2.08
VPS55P47111 YJR056CYJR056C 711 nt2.03□□□□□ -2.08
VPS55P47111 YMR194C-AYMR194C-A 225 nt2.03□□□□□ -2.08
VPS55P47111 KTI11YBL071W-A 249 nt2.03□□□□□ -2.08
VPS55P47111 NRG2YBR066C 663 nt2.03□□□□□ -2.08
VPS55P47111 CMR3YPR013C 954 nt2.03□□□□□ -2.08
VPS55P47111 MCM16YPR046W 546 nt2.03□□□□□ -2.08
VPS55P47111 YBR085C-AYBR085C-A 258 nt2.03□□□□□ -2.08
VPS55P47111 EPO1YMR124W 2832 nt2.03□□□□□ -2.09
VPS55P47111 MSM1YGR171C 1728 nt2.03□□□□□ -2.09
VPS55P47111 NEW1YPL226W 3591 nt2.02□□□□□ -2.09
VPS55P47111 GIN4YDR507C 3429 nt2.02□□□□□ -2.09
VPS55P47111 MST27YGL051W 705 nt2.02□□□□□ -2.09
VPS55P47111 YHR032W-AYHR032W-A 180 nt2.02□□□□□ -2.09
VPS55P47111 PEX18YHR160C 852 nt2.02□□□□□ -2.09
VPS55P47111 YHR213WYHR213W 597 nt2.02□□□□□ -2.09
VPS55P47111 YLR124WYLR124W 345 nt2.02□□□□□ -2.09
VPS55P47111 YAR062WYAR062W 597 nt2.02□□□□□ -2.09
VPS55P47111 SEC65YML105C 822 nt2.02□□□□□ -2.09
VPS55P47111 REC114YMR133W 1287 nt2.02□□□□□ -2.09
VPS55P47111 SIL1YOL031C 1266 nt2.02□□□□□ -2.09
VPS55P47111 HAA1YPR008W 2085 nt2.02□□□□□ -2.09
VPS55P47111 IKI3YLR384C 4050 nt2.01□□□□□ -2.09
VPS55P47111 SWC4YGR002C 1431 nt2.01□□□□□ -2.09
VPS55P47111 TRM13YOL125W 1431 nt2.01□□□□□ -2.09
VPS55P47111 HER2YMR293C 1395 nt2.01□□□□□ -2.09
VPS55P47111 YIP5YGL161C 933 nt2.01□□□□□ -2.09
VPS55P47111 MPC3YGR243W 441 nt2.01□□□□□ -2.09
VPS55P47111 YJR111CYJR111C 852 nt2.01□□□□□ -2.09
VPS55P47111 PEX12YMR026C 1200 nt2.01□□□□□ -2.09
VPS55P47111 RPB8YOR224C 441 nt2.01□□□□□ -2.09
VPS55P47111 SRO77YBL106C 3033 nt2.01□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms