Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.09■□□□□ 0.97
Sdc2P43407 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sdc2P43407 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sdc2P43407 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.09■□□□□ 0.97
Sdc2P43407 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sdc2P43407 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Sdc2P43407 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdc2P43407 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdc2P43407 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Sdc2P43407 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdc2P43407 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdc2P43407 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Sdc2P43407 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdc2P43407 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdc2P43407 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdc2P43407 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.08■□□□□ 0.97
Sdc2P43407 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.08■□□□□ 0.97
Sdc2P43407 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sdc2P43407 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Sdc2P43407 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Sdc2P43407 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sdc2P43407 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Sdc2P43407 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc2P43407 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc2P43407 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc2P43407 Gm27454-201ENSMUST00000185090 204 ntBASIC21.07■□□□□ 0.96
Sdc2P43407 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc2P43407 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sdc2P43407 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
Sdc2P43407 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Sdc2P43407 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc2P43407 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc2P43407 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc2P43407 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sdc2P43407 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc2P43407 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Sdc2P43407 Gm27801-201ENSMUST00000184174 223 ntBASIC21.06■□□□□ 0.96
Sdc2P43407 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc2P43407 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.06■□□□□ 0.96
Sdc2P43407 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc2P43407 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sdc2P43407 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sdc2P43407 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sdc2P43407 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sdc2P43407 Gm7860-201ENSMUST00000121190 879 ntBASIC21.05■□□□□ 0.96
Sdc2P43407 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Sdc2P43407 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.05■□□□□ 0.96
Sdc2P43407 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sdc2P43407 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sdc2P43407 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sdc2P43407 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc2P43407 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc2P43407 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sdc2P43407 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc2P43407 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.04■□□□□ 0.96
Sdc2P43407 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc2P43407 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.04■□□□□ 0.96
Sdc2P43407 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc2P43407 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc2P43407 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sdc2P43407 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sdc2P43407 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sdc2P43407 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Sdc2P43407 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc2P43407 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc2P43407 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc2P43407 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc2P43407 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc2P43407 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.03■□□□□ 0.96
Sdc2P43407 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc2P43407 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.03■□□□□ 0.96
Sdc2P43407 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc2P43407 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
Sdc2P43407 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sdc2P43407 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sdc2P43407 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sdc2P43407 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sdc2P43407 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Sdc2P43407 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sdc2P43407 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.02■□□□□ 0.96
Sdc2P43407 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sdc2P43407 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sdc2P43407 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Sdc2P43407 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sdc2P43407 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Sdc2P43407 Gm6139-201ENSMUST00000079261 882 ntBASIC21.01■□□□□ 0.95
Sdc2P43407 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sdc2P43407 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.01■□□□□ 0.95
Sdc2P43407 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sdc2P43407 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Sdc2P43407 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms