Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.79■□□□□ 0.76
Rfc1P35601 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rfc1P35601 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc1P35601 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfc1P35601 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.78■□□□□ 0.76
Rfc1P35601 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rfc1P35601 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Rfc1P35601 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfc1P35601 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rfc1P35601 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rfc1P35601 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc1P35601 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc1P35601 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc1P35601 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.77■□□□□ 0.76
Rfc1P35601 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.77■□□□□ 0.76
Rfc1P35601 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rfc1P35601 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc1P35601 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfc1P35601 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rfc1P35601 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfc1P35601 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfc1P35601 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfc1P35601 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rfc1P35601 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.76■□□□□ 0.75
Rfc1P35601 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.76■□□□□ 0.75
Rfc1P35601 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfc1P35601 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Rfc1P35601 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Rfc1P35601 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.75■□□□□ 0.75
Rfc1P35601 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc1P35601 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc1P35601 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc1P35601 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc1P35601 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc1P35601 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfc1P35601 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.74■□□□□ 0.75
Rfc1P35601 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc1P35601 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc1P35601 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.74■□□□□ 0.75
Rfc1P35601 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc1P35601 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc1P35601 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc1P35601 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc1P35601 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc1P35601 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc1P35601 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfc1P35601 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc1P35601 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc1P35601 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc1P35601 Gm9870-201ENSMUST00000063874 645 ntBASIC19.73■□□□□ 0.75
Rfc1P35601 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.73■□□□□ 0.75
Rfc1P35601 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc1P35601 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc1P35601 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfc1P35601 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.73■□□□□ 0.75
Rfc1P35601 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfc1P35601 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc1P35601 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc1P35601 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc1P35601 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfc1P35601 Gm43530-201ENSMUST00000195920 274 ntBASIC19.72■□□□□ 0.75
Rfc1P35601 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.72■□□□□ 0.75
Rfc1P35601 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc1P35601 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc1P35601 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc1P35601 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc1P35601 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Rfc1P35601 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfc1P35601 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
Rfc1P35601 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rfc1P35601 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfc1P35601 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms