Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Thbs1P35441 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Thbs1P35441 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Thbs1P35441 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thbs1P35441 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.39■□□□□ 0.37
Thbs1P35441 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thbs1P35441 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.39■□□□□ 0.37
Thbs1P35441 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.39■□□□□ 0.37
Thbs1P35441 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.39■□□□□ 0.37
Thbs1P35441 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thbs1P35441 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thbs1P35441 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Thbs1P35441 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Thbs1P35441 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thbs1P35441 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.38■□□□□ 0.37
Thbs1P35441 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Thbs1P35441 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.38■□□□□ 0.37
Thbs1P35441 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thbs1P35441 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.37■□□□□ 0.37
Thbs1P35441 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.37■□□□□ 0.37
Thbs1P35441 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.37■□□□□ 0.37
Thbs1P35441 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Thbs1P35441 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.37■□□□□ 0.37
Thbs1P35441 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thbs1P35441 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thbs1P35441 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.36■□□□□ 0.37
Thbs1P35441 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thbs1P35441 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Thbs1P35441 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.35■□□□□ 0.37
Thbs1P35441 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.35■□□□□ 0.37
Thbs1P35441 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thbs1P35441 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Thbs1P35441 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Thbs1P35441 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Thbs1P35441 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Thbs1P35441 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thbs1P35441 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thbs1P35441 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thbs1P35441 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thbs1P35441 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thbs1P35441 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Thbs1P35441 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Thbs1P35441 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Thbs1P35441 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Thbs1P35441 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Thbs1P35441 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thbs1P35441 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Thbs1P35441 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Thbs1P35441 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thbs1P35441 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thbs1P35441 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thbs1P35441 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thbs1P35441 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thbs1P35441 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Thbs1P35441 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thbs1P35441 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thbs1P35441 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Thbs1P35441 Gm38205-201ENSMUST00000192243 258 ntBASIC17.32■□□□□ 0.36
Thbs1P35441 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Thbs1P35441 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms