Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.22■□□□□ 0.67
Mmp13P33435 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp13P33435 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.22■□□□□ 0.67
Mmp13P33435 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Mmp13P33435 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp13P33435 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp13P33435 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp13P33435 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.22■□□□□ 0.67
Mmp13P33435 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp13P33435 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp13P33435 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.21■□□□□ 0.67
Mmp13P33435 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp13P33435 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Mmp13P33435 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.21■□□□□ 0.67
Mmp13P33435 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp13P33435 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp13P33435 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp13P33435 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mmp13P33435 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Mmp13P33435 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp13P33435 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp13P33435 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp13P33435 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.2■□□□□ 0.66
Mmp13P33435 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Gm43060-201ENSMUST00000200621 289 ntBASIC19.2■□□□□ 0.66
Mmp13P33435 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.2■□□□□ 0.66
Mmp13P33435 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Mmp13P33435 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp13P33435 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.19■□□□□ 0.66
Mmp13P33435 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Mmp13P33435 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.19■□□□□ 0.66
Mmp13P33435 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Mmp13P33435 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.19■□□□□ 0.66
Mmp13P33435 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mmp13P33435 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mmp13P33435 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.19■□□□□ 0.66
Mmp13P33435 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp13P33435 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Mmp13P33435 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Gm11421-201ENSMUST00000122124 294 ntBASIC19.18■□□□□ 0.66
Mmp13P33435 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.18■□□□□ 0.66
Mmp13P33435 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Mmp13P33435 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp13P33435 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.17■□□□□ 0.66
Mmp13P33435 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.17■□□□□ 0.66
Mmp13P33435 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Mmp13P33435 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp13P33435 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp13P33435 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mmp13P33435 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp13P33435 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp13P33435 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp13P33435 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp13P33435 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mmp13P33435 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms