Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slc6a13P31649 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Slc6a13P31649 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a13P31649 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.14■□□□□ 0.65
Slc6a13P31649 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a13P31649 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a13P31649 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Slc6a13P31649 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.14■□□□□ 0.65
Slc6a13P31649 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a13P31649 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a13P31649 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a13P31649 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Slc6a13P31649 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.13■□□□□ 0.65
Slc6a13P31649 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.13■□□□□ 0.65
Slc6a13P31649 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a13P31649 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a13P31649 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a13P31649 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a13P31649 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.13■□□□□ 0.65
Slc6a13P31649 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a13P31649 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a13P31649 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a13P31649 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a13P31649 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc6a13P31649 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Slc6a13P31649 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Slc6a13P31649 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.12■□□□□ 0.65
Slc6a13P31649 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 AV356131-201ENSMUST00000206201 750 ntBASIC19.12■□□□□ 0.65
Slc6a13P31649 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.12■□□□□ 0.65
Slc6a13P31649 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc6a13P31649 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Gm10849-201ENSMUST00000100397 618 ntBASIC19.11■□□□□ 0.65
Slc6a13P31649 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Slc6a13P31649 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc6a13P31649 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc6a13P31649 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Slc6a13P31649 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.11■□□□□ 0.65
Slc6a13P31649 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc6a13P31649 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a13P31649 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Slc6a13P31649 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Slc6a13P31649 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a13P31649 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.1■□□□□ 0.65
Slc6a13P31649 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a13P31649 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a13P31649 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a13P31649 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a13P31649 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a13P31649 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Slc6a13P31649 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.1■□□□□ 0.65
Slc6a13P31649 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.1■□□□□ 0.65
Slc6a13P31649 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc6a13P31649 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.09■□□□□ 0.65
Slc6a13P31649 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.09■□□□□ 0.65
Slc6a13P31649 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.09■□□□□ 0.65
Slc6a13P31649 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.09■□□□□ 0.65
Slc6a13P31649 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.09■□□□□ 0.65
Slc6a13P31649 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc6a13P31649 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc6a13P31649 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Slc6a13P31649 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Slc6a13P31649 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc6a13P31649 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc6a13P31649 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc6a13P31649 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slc6a13P31649 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.08■□□□□ 0.64
Slc6a13P31649 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.08■□□□□ 0.64
Slc6a13P31649 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc6a13P31649 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms