Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nedd8P29595 Gm14523-201ENSMUST00000117260 558 ntBASIC17.45■□□□□ 0.38
Nedd8P29595 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nedd8P29595 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.45■□□□□ 0.38
Nedd8P29595 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nedd8P29595 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nedd8P29595 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nedd8P29595 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nedd8P29595 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nedd8P29595 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nedd8P29595 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nedd8P29595 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nedd8P29595 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nedd8P29595 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nedd8P29595 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nedd8P29595 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nedd8P29595 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nedd8P29595 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nedd8P29595 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nedd8P29595 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.43■□□□□ 0.38
Nedd8P29595 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nedd8P29595 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.42■□□□□ 0.38
Nedd8P29595 AA386476-201ENSMUST00000098781 1665 ntBASIC17.42■□□□□ 0.38
Nedd8P29595 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd8P29595 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nedd8P29595 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.42■□□□□ 0.38
Nedd8P29595 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd8P29595 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.42■□□□□ 0.38
Nedd8P29595 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd8P29595 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nedd8P29595 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd8P29595 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd8P29595 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.42■□□□□ 0.38
Nedd8P29595 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.42■□□□□ 0.38
Nedd8P29595 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Nedd8P29595 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd8P29595 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd8P29595 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.42■□□□□ 0.38
Nedd8P29595 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.42■□□□□ 0.38
Nedd8P29595 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nedd8P29595 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd8P29595 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd8P29595 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd8P29595 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd8P29595 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.41■□□□□ 0.38
Nedd8P29595 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd8P29595 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd8P29595 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd8P29595 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Nedd8P29595 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.4■□□□□ 0.38
Nedd8P29595 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.4■□□□□ 0.38
Nedd8P29595 Gm7143-201ENSMUST00000222811 859 ntBASIC17.4■□□□□ 0.38
Nedd8P29595 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.4■□□□□ 0.38
Nedd8P29595 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nedd8P29595 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nedd8P29595 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nedd8P29595 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nedd8P29595 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd8P29595 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Nedd8P29595 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nedd8P29595 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nedd8P29595 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nedd8P29595 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.39■□□□□ 0.37
Nedd8P29595 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.39■□□□□ 0.37
Nedd8P29595 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Nedd8P29595 Gm7332-201ENSMUST00000118351 454 ntBASIC17.39■□□□□ 0.37
Nedd8P29595 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd8P29595 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd8P29595 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms