Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BrafP28028 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
BrafP28028 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
BrafP28028 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BrafP28028 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BrafP28028 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BrafP28028 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
BrafP28028 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
BrafP28028 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BrafP28028 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BrafP28028 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BrafP28028 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BrafP28028 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BrafP28028 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BrafP28028 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BrafP28028 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BrafP28028 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.33■□□□□ 0.52
BrafP28028 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BrafP28028 Serp2-204ENSMUST00000228055 705 ntBASIC18.33■□□□□ 0.52
BrafP28028 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BrafP28028 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BrafP28028 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.33■□□□□ 0.52
BrafP28028 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BrafP28028 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BrafP28028 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BrafP28028 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.32■□□□□ 0.52
BrafP28028 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BrafP28028 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.32■□□□□ 0.52
BrafP28028 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.32■□□□□ 0.52
BrafP28028 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
BrafP28028 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.31■□□□□ 0.52
BrafP28028 Gm11421-201ENSMUST00000122124 294 ntBASIC18.31■□□□□ 0.52
BrafP28028 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.31■□□□□ 0.52
BrafP28028 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.31■□□□□ 0.52
BrafP28028 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BrafP28028 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
BrafP28028 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BrafP28028 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BrafP28028 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BrafP28028 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BrafP28028 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BrafP28028 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BrafP28028 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.3■□□□□ 0.52
BrafP28028 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.3■□□□□ 0.52
BrafP28028 Gm6139-201ENSMUST00000079261 882 ntBASIC18.3■□□□□ 0.52
BrafP28028 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BrafP28028 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.3■□□□□ 0.52
BrafP28028 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BrafP28028 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BrafP28028 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BrafP28028 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BrafP28028 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BrafP28028 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
BrafP28028 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BrafP28028 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BrafP28028 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BrafP28028 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
BrafP28028 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.29■□□□□ 0.52
BrafP28028 Smad6-203ENSMUST00000179458 273 ntBASIC18.29■□□□□ 0.52
BrafP28028 Gm43173-201ENSMUST00000202246 593 ntBASIC18.29■□□□□ 0.52
BrafP28028 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BrafP28028 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BrafP28028 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BrafP28028 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BrafP28028 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BrafP28028 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
BrafP28028 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.28■□□□□ 0.52
BrafP28028 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
BrafP28028 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
BrafP28028 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms