Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl6P27784 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ccl6P27784 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Ccl6P27784 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl6P27784 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ccl6P27784 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccl6P27784 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl6P27784 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl6P27784 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl6P27784 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl6P27784 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccl6P27784 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ccl6P27784 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccl6P27784 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ccl6P27784 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ccl6P27784 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Ccl6P27784 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.64□□□□□ -0.07
Ccl6P27784 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccl6P27784 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.64□□□□□ -0.07
Ccl6P27784 Gm43060-201ENSMUST00000200621 289 ntBASIC14.64□□□□□ -0.07
Ccl6P27784 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.64□□□□□ -0.07
Ccl6P27784 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Ccl6P27784 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl6P27784 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.63□□□□□ -0.07
Ccl6P27784 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccl6P27784 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccl6P27784 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ccl6P27784 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ccl6P27784 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.63□□□□□ -0.07
Ccl6P27784 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Ccl6P27784 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.63□□□□□ -0.07
Ccl6P27784 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ccl6P27784 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Ccl6P27784 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl6P27784 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccl6P27784 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ccl6P27784 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl6P27784 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl6P27784 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccl6P27784 Gm27801-201ENSMUST00000184174 223 ntBASIC14.62□□□□□ -0.07
Ccl6P27784 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.62□□□□□ -0.07
Ccl6P27784 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl6P27784 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl6P27784 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl6P27784 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl6P27784 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ccl6P27784 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl6P27784 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl6P27784 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl6P27784 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ccl6P27784 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.61□□□□□ -0.07
Ccl6P27784 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccl6P27784 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccl6P27784 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.61□□□□□ -0.07
Ccl6P27784 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccl6P27784 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl6P27784 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl6P27784 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccl6P27784 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl6P27784 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms