Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nfkb1P25799 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nfkb1P25799 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nfkb1P25799 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.32■□□□□ 0.68
Nfkb1P25799 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.31■□□□□ 0.68
Nfkb1P25799 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nfkb1P25799 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfkb1P25799 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfkb1P25799 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfkb1P25799 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfkb1P25799 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.3■□□□□ 0.68
Nfkb1P25799 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nfkb1P25799 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.3■□□□□ 0.68
Nfkb1P25799 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nfkb1P25799 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.3■□□□□ 0.68
Nfkb1P25799 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfkb1P25799 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nfkb1P25799 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Gm26524-201ENSMUST00000192339 390 ntBASIC19.29■□□□□ 0.68
Nfkb1P25799 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.29■□□□□ 0.68
Nfkb1P25799 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nfkb1P25799 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nfkb1P25799 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.28■□□□□ 0.68
Nfkb1P25799 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Nfkb1P25799 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nfkb1P25799 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.28■□□□□ 0.68
Nfkb1P25799 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nfkb1P25799 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nfkb1P25799 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nfkb1P25799 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nfkb1P25799 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.27■□□□□ 0.68
Nfkb1P25799 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.27■□□□□ 0.68
Nfkb1P25799 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.27■□□□□ 0.68
Nfkb1P25799 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nfkb1P25799 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.27■□□□□ 0.68
Nfkb1P25799 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nfkb1P25799 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nfkb1P25799 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.26■□□□□ 0.67
Nfkb1P25799 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nfkb1P25799 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nfkb1P25799 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nfkb1P25799 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.26■□□□□ 0.67
Nfkb1P25799 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nfkb1P25799 Gm20049-201ENSMUST00000219950 730 ntBASIC19.26■□□□□ 0.67
Nfkb1P25799 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.26■□□□□ 0.67
Nfkb1P25799 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.26■□□□□ 0.67
Nfkb1P25799 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nfkb1P25799 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nfkb1P25799 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nfkb1P25799 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nfkb1P25799 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Nfkb1P25799 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nfkb1P25799 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.25■□□□□ 0.67
Nfkb1P25799 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Nfkb1P25799 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms