Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.58■□□□□ 0.72
Hoxd8P23463 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.58■□□□□ 0.72
Hoxd8P23463 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxd8P23463 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxd8P23463 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Hoxd8P23463 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.58■□□□□ 0.72
Hoxd8P23463 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxd8P23463 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxd8P23463 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxd8P23463 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.57■□□□□ 0.72
Hoxd8P23463 Gm18666-201ENSMUST00000190039 958 ntBASIC19.57■□□□□ 0.72
Hoxd8P23463 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxd8P23463 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxd8P23463 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxd8P23463 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Hoxd8P23463 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxd8P23463 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxd8P23463 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hoxd8P23463 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxd8P23463 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxd8P23463 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxd8P23463 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxd8P23463 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxd8P23463 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxd8P23463 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxd8P23463 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxd8P23463 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxd8P23463 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxd8P23463 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxd8P23463 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxd8P23463 Gm2399-201ENSMUST00000104944 225 ntBASIC19.55■□□□□ 0.72
Hoxd8P23463 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hoxd8P23463 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxd8P23463 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.55■□□□□ 0.72
Hoxd8P23463 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hoxd8P23463 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxd8P23463 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxd8P23463 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxd8P23463 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxd8P23463 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxd8P23463 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxd8P23463 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.54■□□□□ 0.72
Hoxd8P23463 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Hoxd8P23463 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxd8P23463 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxd8P23463 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.54■□□□□ 0.72
Hoxd8P23463 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxd8P23463 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxd8P23463 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxd8P23463 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxd8P23463 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.53■□□□□ 0.72
Hoxd8P23463 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxd8P23463 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxd8P23463 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.53■□□□□ 0.72
Hoxd8P23463 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Hoxd8P23463 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.53■□□□□ 0.72
Hoxd8P23463 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Hoxd8P23463 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxd8P23463 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxd8P23463 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxd8P23463 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.53■□□□□ 0.72
Hoxd8P23463 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxd8P23463 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxd8P23463 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxd8P23463 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxd8P23463 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.52■□□□□ 0.72
Hoxd8P23463 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxd8P23463 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Hoxd8P23463 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.52■□□□□ 0.72
Hoxd8P23463 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.52■□□□□ 0.72
Hoxd8P23463 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.52■□□□□ 0.72
Hoxd8P23463 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxd8P23463 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hoxd8P23463 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.52■□□□□ 0.72
Hoxd8P23463 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxd8P23463 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.52■□□□□ 0.72
Hoxd8P23463 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxd8P23463 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxd8P23463 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxd8P23463 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Hoxd8P23463 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxd8P23463 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxd8P23463 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Hoxd8P23463 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hoxd8P23463 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxd8P23463 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hoxd8P23463 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxd8P23463 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.51■□□□□ 0.71
Hoxd8P23463 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.51■□□□□ 0.71
Hoxd8P23463 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.51■□□□□ 0.71
Hoxd8P23463 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxd8P23463 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxd8P23463 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxd8P23463 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Hoxd8P23463 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hoxd8P23463 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxd8P23463 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxd8P23463 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxd8P23463 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxd8P23463 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms