Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmga1P17095 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hmga1P17095 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmga1P17095 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hmga1P17095 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Hmga1P17095 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hmga1P17095 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.36■□□□□ 0.69
Hmga1P17095 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.36■□□□□ 0.69
Hmga1P17095 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmga1P17095 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.36■□□□□ 0.69
Hmga1P17095 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hmga1P17095 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hmga1P17095 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hmga1P17095 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Hmga1P17095 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Hmga1P17095 Gm37856-201ENSMUST00000191634 999 ntBASIC19.35■□□□□ 0.69
Hmga1P17095 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hmga1P17095 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmga1P17095 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmga1P17095 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Hmga1P17095 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.34■□□□□ 0.69
Hmga1P17095 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.34■□□□□ 0.69
Hmga1P17095 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmga1P17095 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmga1P17095 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmga1P17095 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hmga1P17095 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hmga1P17095 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.34■□□□□ 0.69
Hmga1P17095 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hmga1P17095 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hmga1P17095 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hmga1P17095 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Hmga1P17095 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.33■□□□□ 0.68
Hmga1P17095 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmga1P17095 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Hmga1P17095 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hmga1P17095 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Hmga1P17095 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmga1P17095 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmga1P17095 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
Hmga1P17095 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmga1P17095 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmga1P17095 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmga1P17095 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hmga1P17095 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmga1P17095 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hmga1P17095 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmga1P17095 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hmga1P17095 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmga1P17095 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmga1P17095 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmga1P17095 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmga1P17095 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmga1P17095 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmga1P17095 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hmga1P17095 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Hmga1P17095 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.31■□□□□ 0.68
Hmga1P17095 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmga1P17095 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hmga1P17095 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmga1P17095 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.3■□□□□ 0.68
Hmga1P17095 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmga1P17095 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmga1P17095 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.3■□□□□ 0.68
Hmga1P17095 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmga1P17095 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.3■□□□□ 0.68
Hmga1P17095 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.3■□□□□ 0.68
Hmga1P17095 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Hmga1P17095 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmga1P17095 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Hmga1P17095 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hmga1P17095 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hmga1P17095 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmga1P17095 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Hmga1P17095 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmga1P17095 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmga1P17095 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.29■□□□□ 0.68
Hmga1P17095 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmga1P17095 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmga1P17095 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmga1P17095 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.29■□□□□ 0.68
Hmga1P17095 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hmga1P17095 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmga1P17095 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hmga1P17095 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.28■□□□□ 0.68
Hmga1P17095 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmga1P17095 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hmga1P17095 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hmga1P17095 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms