Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccl3P10855 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccl3P10855 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccl3P10855 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccl3P10855 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccl3P10855 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccl3P10855 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.7■□□□□ 0.26
Ccl3P10855 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccl3P10855 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccl3P10855 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.7■□□□□ 0.26
Ccl3P10855 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccl3P10855 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccl3P10855 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccl3P10855 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccl3P10855 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccl3P10855 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.69■□□□□ 0.26
Ccl3P10855 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.69■□□□□ 0.26
Ccl3P10855 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.69■□□□□ 0.26
Ccl3P10855 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.69■□□□□ 0.26
Ccl3P10855 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ccl3P10855 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccl3P10855 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccl3P10855 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccl3P10855 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ccl3P10855 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccl3P10855 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ccl3P10855 Gm15378-201ENSMUST00000121894 207 ntBASIC16.68■□□□□ 0.26
Ccl3P10855 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ccl3P10855 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccl3P10855 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccl3P10855 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccl3P10855 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccl3P10855 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccl3P10855 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccl3P10855 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccl3P10855 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccl3P10855 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccl3P10855 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccl3P10855 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccl3P10855 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Ccl3P10855 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.67■□□□□ 0.26
Ccl3P10855 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccl3P10855 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Ccl3P10855 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccl3P10855 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccl3P10855 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccl3P10855 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Gm13158-201ENSMUST00000122007 736 ntBASIC16.66■□□□□ 0.26
Ccl3P10855 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccl3P10855 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccl3P10855 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccl3P10855 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccl3P10855 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ccl3P10855 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccl3P10855 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccl3P10855 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccl3P10855 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccl3P10855 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccl3P10855 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccl3P10855 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.65■□□□□ 0.26
Ccl3P10855 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccl3P10855 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.65■□□□□ 0.26
Ccl3P10855 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ccl3P10855 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.65■□□□□ 0.26
Ccl3P10855 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccl3P10855 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccl3P10855 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccl3P10855 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccl3P10855 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccl3P10855 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccl3P10855 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.64■□□□□ 0.25
Ccl3P10855 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccl3P10855 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms