Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccl1P10146 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.64□□□□□ -0.07
Ccl1P10146 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.64□□□□□ -0.07
Ccl1P10146 Gm5786-201ENSMUST00000085368 882 ntBASIC14.64□□□□□ -0.07
Ccl1P10146 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl1P10146 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ccl1P10146 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccl1P10146 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ccl1P10146 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccl1P10146 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccl1P10146 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccl1P10146 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.63□□□□□ -0.07
Ccl1P10146 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.63□□□□□ -0.07
Ccl1P10146 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl1P10146 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccl1P10146 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.62□□□□□ -0.07
Ccl1P10146 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ccl1P10146 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.62□□□□□ -0.07
Ccl1P10146 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl1P10146 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Ccl1P10146 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccl1P10146 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl1P10146 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.6□□□□□ -0.07
Ccl1P10146 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccl1P10146 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Ccl1P10146 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl1P10146 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccl1P10146 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
Ccl1P10146 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.59□□□□□ -0.07
Ccl1P10146 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Ccl1P10146 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl1P10146 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms