Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Gm15820-201ENSMUST00000201566 728 ntBASIC17.78■□□□□ 0.44
ApoeP08226 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ApoeP08226 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ApoeP08226 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ApoeP08226 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.77■□□□□ 0.44
ApoeP08226 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.77■□□□□ 0.44
ApoeP08226 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ApoeP08226 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ApoeP08226 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ApoeP08226 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ApoeP08226 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ApoeP08226 Gm22238-201ENSMUST00000175222 88 ntBASIC17.76■□□□□ 0.43
ApoeP08226 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.76■□□□□ 0.43
ApoeP08226 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ApoeP08226 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ApoeP08226 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ApoeP08226 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ApoeP08226 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.75■□□□□ 0.43
ApoeP08226 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ApoeP08226 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.75■□□□□ 0.43
ApoeP08226 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ApoeP08226 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ApoeP08226 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ApoeP08226 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.74■□□□□ 0.43
ApoeP08226 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
ApoeP08226 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ApoeP08226 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.74■□□□□ 0.43
ApoeP08226 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ApoeP08226 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ApoeP08226 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ApoeP08226 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.74■□□□□ 0.43
ApoeP08226 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
ApoeP08226 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
ApoeP08226 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ApoeP08226 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.73■□□□□ 0.43
ApoeP08226 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
ApoeP08226 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.73■□□□□ 0.43
ApoeP08226 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ApoeP08226 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ApoeP08226 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.72■□□□□ 0.43
ApoeP08226 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.72■□□□□ 0.43
ApoeP08226 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ApoeP08226 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.72■□□□□ 0.43
ApoeP08226 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.72■□□□□ 0.43
ApoeP08226 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.72■□□□□ 0.43
ApoeP08226 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ApoeP08226 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ApoeP08226 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
ApoeP08226 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ApoeP08226 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms